Choose BLAST program and sequence databases (mutiple databases can be selected by CTRL+Click):
Program blastn blastp blastx tblastn tblastx Database Paroedura picta whole genome assembly v2.0 Paroedura picta whole genome assembly v1.0 Paroedura picta predicted peptide sequences v1.0 Paroedura picta predicted coding nucleotide sequences v1.0 Paroedura picta de novo transcriptome assembly (Hara et al., 2015)
Enter the query nucleotide/protein sequence(s) in FASTA format or plain text(≥2 sequenses should be entered in FASTA format)
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Low complexity
Mask for lookup table only
Expect:
Maximum number of subjects:
Other advanced options (click to open/collapse)
BLASTN task: blastn megablast dc-megablast blastn-short rmblastn
Word size:
Gap open:
Gap extended:
Mismatch penalty:
Match reward:
Substitution matrix: BLOSUM62 BLOSUM45 BLOSUM80 PAM30 PAM70